PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_009769627.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 224aa    MW: 23991 Da    PI: 10.1613
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_009769627.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.53.9e-192776255
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    +y+GVr ++ +gr++AeIrdp   g+++r++lg+f+ta eAaka++ a++ l+g
  XP_009769627.1 27 HYRGVRKRP-WGRYAAEIRDP---GQKTRVWLGTFDTAVEAAKAYDTAARLLRG 76
                    6********.**********8...557***********************9998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103222.552784IPR001471AP2/ERF domain
CDDcd000182.55E-302783No hitNo description
SuperFamilySSF541714.18E-212785IPR016177DNA-binding domain
SMARTSM003802.1E-372790IPR001471AP2/ERF domain
PfamPF008473.8E-122776IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.2E-302784IPR001471AP2/ERF domain
PRINTSPR003671.5E-102839IPR001471AP2/ERF domain
PRINTSPR003671.5E-105066IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 224 aa     Download sequence    Send to blast
MAENVHLAGT VAVPTANGGG VCSDEVHYRG VRKRPWGRYA AEIRDPGQKT RVWLGTFDTA  60
VEAAKAYDTA ARLLRGRRAI TNFSLTTEDN LMNTRDFMAK LSTRNHVNIN TNNHGPIKNS  120
DIGSSSGGGG AVRIPLPIQN PQSRHFPVAG CSAPLQLERD RYYVEALTIA GVIVNRDPSS  180
QKKTIDFIGG GVNGGSGRGV QTEPPTTSTR ALNLELTLAP PGNM
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A2e-202785564ATERF1
3gcc_A2e-202785564ATERF1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAB6690870.0AB669087.1 Nicotiana tabacum NtERF#230 gene for ethylene response factor #230, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009769627.11e-166PREDICTED: ethylene-responsive transcription factor 8-like
TrEMBLR4WAQ71e-148R4WAQ7_TOBAC; Ethylene response factor #230
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA1535068
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G44210.12e-33erf domain protein 9